Cryo-electron tomography pipeline for plasma membranes

Abstract Cryo-electron tomography (cryoET) provides sub-nanometer protein structure within the dense cellular environment. Existing sample preparation methods are insufficient at accessing the plasma membrane and its associated proteins. Here, we present a correlative cryo-electron tomography pipeli...

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Main Authors: Willy W. Sun, Dennis J. Michalak, Kem A. Sochacki, Prasanthi Kunamaneni, Marco A. Alfonzo-Méndez, Andreas M. Arnold, Marie-Paule Strub, Jenny E. Hinshaw, Justin W. Taraska
Format: Article
Language:English
Published: Nature Portfolio 2025-01-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-56045-z
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author Willy W. Sun
Dennis J. Michalak
Kem A. Sochacki
Prasanthi Kunamaneni
Marco A. Alfonzo-Méndez
Andreas M. Arnold
Marie-Paule Strub
Jenny E. Hinshaw
Justin W. Taraska
author_facet Willy W. Sun
Dennis J. Michalak
Kem A. Sochacki
Prasanthi Kunamaneni
Marco A. Alfonzo-Méndez
Andreas M. Arnold
Marie-Paule Strub
Jenny E. Hinshaw
Justin W. Taraska
author_sort Willy W. Sun
collection DOAJ
description Abstract Cryo-electron tomography (cryoET) provides sub-nanometer protein structure within the dense cellular environment. Existing sample preparation methods are insufficient at accessing the plasma membrane and its associated proteins. Here, we present a correlative cryo-electron tomography pipeline optimally suited to image large ultra-thin areas of isolated basal and apical plasma membranes. The pipeline allows for angstrom-scale structure determination with subtomogram averaging and employs a genetically encodable rapid chemically-induced electron microscopy visible tag for marking specific proteins within the complex cellular environment. The pipeline provides efficient, distributable, low-cost sample preparation and enables targeted structural studies of identified proteins at the plasma membrane of mammalian cells.
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spelling doaj-art-27c7c06964774b0b83eeafad22e465fa2025-02-09T12:43:55ZengNature PortfolioNature Communications2041-17232025-01-0116111410.1038/s41467-025-56045-zCryo-electron tomography pipeline for plasma membranesWilly W. Sun0Dennis J. Michalak1Kem A. Sochacki2Prasanthi Kunamaneni3Marco A. Alfonzo-Méndez4Andreas M. Arnold5Marie-Paule Strub6Jenny E. Hinshaw7Justin W. Taraska8National Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthNational Institute of Diabetes and Digestive and Kidney Diseases, US National Institutes of HealthNational Heart, Lung, and Blood Institute, US National Institutes of HealthAbstract Cryo-electron tomography (cryoET) provides sub-nanometer protein structure within the dense cellular environment. Existing sample preparation methods are insufficient at accessing the plasma membrane and its associated proteins. Here, we present a correlative cryo-electron tomography pipeline optimally suited to image large ultra-thin areas of isolated basal and apical plasma membranes. The pipeline allows for angstrom-scale structure determination with subtomogram averaging and employs a genetically encodable rapid chemically-induced electron microscopy visible tag for marking specific proteins within the complex cellular environment. The pipeline provides efficient, distributable, low-cost sample preparation and enables targeted structural studies of identified proteins at the plasma membrane of mammalian cells.https://doi.org/10.1038/s41467-025-56045-z
spellingShingle Willy W. Sun
Dennis J. Michalak
Kem A. Sochacki
Prasanthi Kunamaneni
Marco A. Alfonzo-Méndez
Andreas M. Arnold
Marie-Paule Strub
Jenny E. Hinshaw
Justin W. Taraska
Cryo-electron tomography pipeline for plasma membranes
Nature Communications
title Cryo-electron tomography pipeline for plasma membranes
title_full Cryo-electron tomography pipeline for plasma membranes
title_fullStr Cryo-electron tomography pipeline for plasma membranes
title_full_unstemmed Cryo-electron tomography pipeline for plasma membranes
title_short Cryo-electron tomography pipeline for plasma membranes
title_sort cryo electron tomography pipeline for plasma membranes
url https://doi.org/10.1038/s41467-025-56045-z
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