Identification and expression analysis of the ZF-HD gene family in castor

Identification and expression analysis of the ZF-HD gene family in castor

[Objective] The ZF-HD family genes of castor were identified and analyzed by sequence analysis, phylogenetic analysis, promoter and expression pattern analysis, to provide a reference for further study of the function of ZF-HD genes in castor. [Methods] Based on the whole genome data of castor, Z...

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Bibliographic Details
Main Authors: XU Xingyuan, HUANG Fenglan, ZHANG Chunlan, ZHU Mengyang, CUI Zhiyu, LIU Peng
Format: Article
Language:zho
Published: Science Press 2024-12-01
Series:Xibei zhiwu xuebao
Subjects:
castor
rczf-hd gene family
bioinformatics
abiotic stress
expression mode
Online Access:http://xbzwxb.alljournal.net/xbzwxb/article/abstract/20240312?st=article_issue
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Summary:[Objective] The ZF-HD family genes of castor were identified and analyzed by sequence analysis, phylogenetic analysis, promoter and expression pattern analysis, to provide a reference for further study of the function of ZF-HD genes in castor. [Methods] Based on the whole genome data of castor, ZF-HD genes were identified, and bioinformatics and expression analysis under abiotic stress were carried out. [Results] A total of 13 ZF-HD genes were identified from castor, which were unevenly distributed on Chr1-Chr10. All 13 RcZF-HD proteins were hydrophilic unstable proteins, and were localized in the nucleus. The RcZF-HD genes were clustered into three subgroups, and the number of genes in each group was different. The gene structure was conserved within the group but diversified between groups. RcZF-HD genes had a large number of tissue-specific elements, stress response elements, and hormone response elements. The ZF-HD genes were widely responsive to abiotic stresses and their expression was tissue-specific. [Conclusion] A total of 13 ZF-HD genes were identified in castor. It is known that members of the castor ZF-HD gene family play an important role in responding to abiotic stress, this research provides theoretical basis for the study of castor􀆳s stress resistance.
ISSN:1000-4025

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