Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context

Summary: Background: The hypomorphic variant rs11209026-A in the IL23R gene provides significant protection against immune-related diseases in Europeans, notably inflammatory bowel diseases (IBD). Today, the A-allele occurs with an average frequency of 5% in Europe. Methods: This study comprised 25...

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Main Authors: Ben Krause-Kyora, Nicolas Antonio da Silva, Elif Kaplan, Daniel Kolbe, Inken Wohlers, Hauke Busch, David Ellinghaus, Amke Caliebe, Efe Sezgin, Almut Nebel, Stefan Schreiber, Sabine Schade-Lindig, Joachim Wahl, Carola Berszin, Michael Francken, Irina Görner, Kerstin Schierhold, Joachim Pechtl, Gisela Grupe, Johannes Müller
Format: Article
Language:English
Published: Elsevier 2025-03-01
Series:EBioMedicine
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Online Access:http://www.sciencedirect.com/science/article/pii/S2352396425000350
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author Ben Krause-Kyora
Nicolas Antonio da Silva
Elif Kaplan
Daniel Kolbe
Inken Wohlers
Hauke Busch
David Ellinghaus
Amke Caliebe
Efe Sezgin
Almut Nebel
Stefan Schreiber
Sabine Schade-Lindig
Joachim Wahl
Carola Berszin
Michael Francken
Irina Görner
Kerstin Schierhold
Joachim Pechtl
Gisela Grupe
Johannes Müller
author_facet Ben Krause-Kyora
Nicolas Antonio da Silva
Elif Kaplan
Daniel Kolbe
Inken Wohlers
Hauke Busch
David Ellinghaus
Amke Caliebe
Efe Sezgin
Almut Nebel
Stefan Schreiber
Sabine Schade-Lindig
Joachim Wahl
Carola Berszin
Michael Francken
Irina Görner
Kerstin Schierhold
Joachim Pechtl
Gisela Grupe
Johannes Müller
author_sort Ben Krause-Kyora
collection DOAJ
description Summary: Background: The hypomorphic variant rs11209026-A in the IL23R gene provides significant protection against immune-related diseases in Europeans, notably inflammatory bowel diseases (IBD). Today, the A-allele occurs with an average frequency of 5% in Europe. Methods: This study comprised 251 ancient genomes from Europe spanning over 14,000 years. In these samples, the investigation focused on admixture-informed analyses and selection scans of rs11209026-A and its haplotypes. Findings: rs11209026-A was found at high frequencies in Anatolian Farmers (AF, 18%). AF later introduced the allele into the ancient European gene-pool. Subsequent admixture caused its frequency to decrease and formed the current southwest-to-northeast allele frequency cline in Europe. The geographic distribution of rs11209026-A may influence the gradient in IBD incidence rates that are highest in northern and eastern Europe. Interpretation: Given the dramatic changes from hunting and gathering to agriculture during the Neolithic, AF might have been exposed to selective pressures from a pro-inflammatory lifestyle and diet. Therefore, the protective A-allele may have increased survival by reducing intestinal inflammation and microbiome dysbiosis. The adaptively evolved function of the variant likely contributes to the high efficacy and low side-effects of modern IL-23 neutralisation therapies for chronic inflammatory diseases. Funding: German Research Foundation (EXC 2167 390884018 and EXC 2150 390870439).
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spelling doaj-art-64c8ea62fad74534b601b000277019dd2025-02-10T04:34:35ZengElsevierEBioMedicine2352-39642025-03-01113105591Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in contextBen Krause-Kyora0Nicolas Antonio da Silva1Elif Kaplan2Daniel Kolbe3Inken Wohlers4Hauke Busch5David Ellinghaus6Amke Caliebe7Efe Sezgin8Almut Nebel9Stefan Schreiber10Sabine Schade-LindigJoachim WahlCarola BerszinMichael FranckenIrina GörnerKerstin SchierholdJoachim PechtlGisela GrupeJohannes MüllerInstitute of Clinical Molecular Biology, Kiel University, Kiel, Germany; Corresponding author. Institute for Clinical Molecular Biology, Kiel University, Rosalind-Franklin-Strasse 12, Kiel, 24105, Germany.Institute of Clinical Molecular Biology, Kiel University, Kiel, GermanyInstitute of Clinical Molecular Biology, Kiel University, Kiel, GermanyInstitute of Clinical Molecular Biology, Kiel University, Kiel, GermanyBiomolecular Data Science in Pneumology, Research Center Borstel, Borstel, Germany; University of Lübeck, Lübeck, GermanyLübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, GermanyInstitute of Clinical Molecular Biology, Kiel University, Kiel, GermanyInstitute of Medical Informatics and Statistics, Kiel University, Kiel, GermanyDepartment of Food Engineering, Izmir Institute of Technology, Urla, Izmir, TurkeyInstitute of Clinical Molecular Biology, Kiel University, Kiel, GermanyInstitute of Clinical Molecular Biology, Kiel University, Kiel, Germany; Department for Medicine I, Kiel University, University Hospital Schleswig-Holstein, Campus Kiel, Kiel, Germany; Corresponding author. Department of Medicine I, Kiel University, University Hospital Schleswig-Holstein, Rosalind-Franklin-Strasse 12, Kiel, 24105, Germany.Summary: Background: The hypomorphic variant rs11209026-A in the IL23R gene provides significant protection against immune-related diseases in Europeans, notably inflammatory bowel diseases (IBD). Today, the A-allele occurs with an average frequency of 5% in Europe. Methods: This study comprised 251 ancient genomes from Europe spanning over 14,000 years. In these samples, the investigation focused on admixture-informed analyses and selection scans of rs11209026-A and its haplotypes. Findings: rs11209026-A was found at high frequencies in Anatolian Farmers (AF, 18%). AF later introduced the allele into the ancient European gene-pool. Subsequent admixture caused its frequency to decrease and formed the current southwest-to-northeast allele frequency cline in Europe. The geographic distribution of rs11209026-A may influence the gradient in IBD incidence rates that are highest in northern and eastern Europe. Interpretation: Given the dramatic changes from hunting and gathering to agriculture during the Neolithic, AF might have been exposed to selective pressures from a pro-inflammatory lifestyle and diet. Therefore, the protective A-allele may have increased survival by reducing intestinal inflammation and microbiome dysbiosis. The adaptively evolved function of the variant likely contributes to the high efficacy and low side-effects of modern IL-23 neutralisation therapies for chronic inflammatory diseases. Funding: German Research Foundation (EXC 2167 390884018 and EXC 2150 390870439).http://www.sciencedirect.com/science/article/pii/S2352396425000350IL23RIL-23-signallingAncient genomicsCrohn's diseaseUlcerative colitisInflammatory bowel diseases
spellingShingle Ben Krause-Kyora
Nicolas Antonio da Silva
Elif Kaplan
Daniel Kolbe
Inken Wohlers
Hauke Busch
David Ellinghaus
Amke Caliebe
Efe Sezgin
Almut Nebel
Stefan Schreiber
Sabine Schade-Lindig
Joachim Wahl
Carola Berszin
Michael Francken
Irina Görner
Kerstin Schierhold
Joachim Pechtl
Gisela Grupe
Johannes Müller
Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
EBioMedicine
IL23R
IL-23-signalling
Ancient genomics
Crohn's disease
Ulcerative colitis
Inflammatory bowel diseases
title Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
title_full Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
title_fullStr Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
title_full_unstemmed Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
title_short Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern EuropeansResearch in context
title_sort neolithic introgression of il23r related protection against chronic inflammatory bowel diseases in modern europeansresearch in context
topic IL23R
IL-23-signalling
Ancient genomics
Crohn's disease
Ulcerative colitis
Inflammatory bowel diseases
url http://www.sciencedirect.com/science/article/pii/S2352396425000350
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