Visualisation of nucleotide sequences

The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimension...

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Bibliographic Details
Main Author: Tomas Rekašius
Format: Article
Language:English
Published: Vilnius University Press 2023-09-01
Series:Lietuvos Matematikos Rinkinys
Subjects:
Online Access:https://www.zurnalai.vu.lt/LMR/article/view/30765
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Summary:The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimensional scaling (MDS) of principal component analysis (PCA) methods.
ISSN:0132-2818
2335-898X