Visualisation of nucleotide sequences
The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimension...
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| Format: | Article |
| Language: | English |
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Vilnius University Press
2023-09-01
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| Series: | Lietuvos Matematikos Rinkinys |
| Subjects: | |
| Online Access: | https://www.zurnalai.vu.lt/LMR/article/view/30765 |
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| _version_ | 1823857911861870592 |
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| author | Tomas Rekašius |
| author_facet | Tomas Rekašius |
| author_sort | Tomas Rekašius |
| collection | DOAJ |
| description |
The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimensional scaling (MDS) of principal component analysis (PCA) methods.
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| format | Article |
| id | doaj-art-7408039e9f9446c88103c70c6557fdb1 |
| institution | Kabale University |
| issn | 0132-2818 2335-898X |
| language | English |
| publishDate | 2023-09-01 |
| publisher | Vilnius University Press |
| record_format | Article |
| series | Lietuvos Matematikos Rinkinys |
| spelling | doaj-art-7408039e9f9446c88103c70c6557fdb12025-02-11T18:12:29ZengVilnius University PressLietuvos Matematikos Rinkinys0132-28182335-898X2023-09-0146spec.10.15388/LMR.2006.30765Visualisation of nucleotide sequencesTomas Rekašius0Vilnius Gediminas Technical University The paper reviews the visualisation problems of genetic sequences and of their analysis results as well as other related problems. A possible formulation of the problem based on similarity, complexity measure (distance) between DNA sequences is proposed. It is solved by making use of multidimensional scaling (MDS) of principal component analysis (PCA) methods. https://www.zurnalai.vu.lt/LMR/article/view/30765DNA sequencescomplexity measuremultidimensional scaling |
| spellingShingle | Tomas Rekašius Visualisation of nucleotide sequences Lietuvos Matematikos Rinkinys DNA sequences complexity measure multidimensional scaling |
| title | Visualisation of nucleotide sequences |
| title_full | Visualisation of nucleotide sequences |
| title_fullStr | Visualisation of nucleotide sequences |
| title_full_unstemmed | Visualisation of nucleotide sequences |
| title_short | Visualisation of nucleotide sequences |
| title_sort | visualisation of nucleotide sequences |
| topic | DNA sequences complexity measure multidimensional scaling |
| url | https://www.zurnalai.vu.lt/LMR/article/view/30765 |
| work_keys_str_mv | AT tomasrekasius visualisationofnucleotidesequences |