Controllable intein splicing and N-terminal cleavage at mesophilic temperatures

Inteins (intervening proteins) interrupt host proteins and are removed through a protein splicing reaction that ligates adjacent N- and C-exteins. The ability of inteins to specifically rearrange peptide bonds has proven exceptionally useful in protein engineering, thus, methods to control intein ac...

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Main Authors: Taylor A. McNeal, Joel Weinberger, Geraldy L. S. Liman, Tia M. Ariagno, David W. Wood, Thomas J. Santangelo, Christopher W. Lennon
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-02-01
Series:Frontiers in Bioengineering and Biotechnology
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Online Access:https://www.frontiersin.org/articles/10.3389/fbioe.2025.1543573/full
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author Taylor A. McNeal
Joel Weinberger
Geraldy L. S. Liman
Tia M. Ariagno
David W. Wood
Thomas J. Santangelo
Christopher W. Lennon
author_facet Taylor A. McNeal
Joel Weinberger
Geraldy L. S. Liman
Tia M. Ariagno
David W. Wood
Thomas J. Santangelo
Christopher W. Lennon
author_sort Taylor A. McNeal
collection DOAJ
description Inteins (intervening proteins) interrupt host proteins and are removed through a protein splicing reaction that ligates adjacent N- and C-exteins. The ability of inteins to specifically rearrange peptide bonds has proven exceptionally useful in protein engineering, thus, methods to control intein activity are of considerable interest. One particularly useful application of inteins is for the removal of an affinity tag following purification of a target protein through N-terminal cleavage (NTC). Typically, extended incubation at high temperature (greater than 50°C) or with an external nucleophile (e.g., dithiothreitol) is required to drive NTC, conditions that compromise the folding of many target proteins. Here, we characterize a variant of the Thermococcus kodakarensis RadA intein that can perform NTC at moderate temperatures in the absence of an external nucleophile. While we find that while NTC is largely inhibited during expression in Escherichia coli at 15°C, rapid and efficient NTC can be activated 37°C. Our results provide an alternative intein-based system – one that does not require either an external nucleophile or prolonged incubation at high temperature to stimulate NTC – that controls intein activity within a temperature range amenable to most mesophilic experimental organisms.
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spelling doaj-art-ed7f61c536bc4b9599ef1549798bbfab2025-02-07T06:49:38ZengFrontiers Media S.A.Frontiers in Bioengineering and Biotechnology2296-41852025-02-011310.3389/fbioe.2025.15435731543573Controllable intein splicing and N-terminal cleavage at mesophilic temperaturesTaylor A. McNeal0Joel Weinberger1Geraldy L. S. Liman2Tia M. Ariagno3David W. Wood4Thomas J. Santangelo5Christopher W. Lennon6Department of Biological Sciences, Murray State University, Murray, KY, United StatesDepartment of Biological Sciences, Murray State University, Murray, KY, United StatesDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, United StatesDepartment of Biological Sciences, Murray State University, Murray, KY, United StatesWilliam G. Lowrie Department of Chemical and Biomolecular Engineering, The Ohio State University, Columbus, OH, United StatesDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, United StatesDepartment of Biological Sciences, Murray State University, Murray, KY, United StatesInteins (intervening proteins) interrupt host proteins and are removed through a protein splicing reaction that ligates adjacent N- and C-exteins. The ability of inteins to specifically rearrange peptide bonds has proven exceptionally useful in protein engineering, thus, methods to control intein activity are of considerable interest. One particularly useful application of inteins is for the removal of an affinity tag following purification of a target protein through N-terminal cleavage (NTC). Typically, extended incubation at high temperature (greater than 50°C) or with an external nucleophile (e.g., dithiothreitol) is required to drive NTC, conditions that compromise the folding of many target proteins. Here, we characterize a variant of the Thermococcus kodakarensis RadA intein that can perform NTC at moderate temperatures in the absence of an external nucleophile. While we find that while NTC is largely inhibited during expression in Escherichia coli at 15°C, rapid and efficient NTC can be activated 37°C. Our results provide an alternative intein-based system – one that does not require either an external nucleophile or prolonged incubation at high temperature to stimulate NTC – that controls intein activity within a temperature range amenable to most mesophilic experimental organisms.https://www.frontiersin.org/articles/10.3389/fbioe.2025.1543573/fullinteinprotein splicingN-terminal cleavagebioseparationsbiosensor
spellingShingle Taylor A. McNeal
Joel Weinberger
Geraldy L. S. Liman
Tia M. Ariagno
David W. Wood
Thomas J. Santangelo
Christopher W. Lennon
Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
Frontiers in Bioengineering and Biotechnology
intein
protein splicing
N-terminal cleavage
bioseparations
biosensor
title Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
title_full Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
title_fullStr Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
title_full_unstemmed Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
title_short Controllable intein splicing and N-terminal cleavage at mesophilic temperatures
title_sort controllable intein splicing and n terminal cleavage at mesophilic temperatures
topic intein
protein splicing
N-terminal cleavage
bioseparations
biosensor
url https://www.frontiersin.org/articles/10.3389/fbioe.2025.1543573/full
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AT tiamariagno controllableinteinsplicingandnterminalcleavageatmesophilictemperatures
AT davidwwood controllableinteinsplicingandnterminalcleavageatmesophilictemperatures
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