Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme

Our previous research revealed that (E)-4-amino-3-methylbut-2-en-1-yl diphosphate (AMBPP) is one of the best inhibitors of IspH, a [4Fe–4S]-dependent enzyme involved in the methylerythritol phosphate pathway that is a valuable target for the discovery of new antibacterial and antiparasitic drugs as...

Full description

Saved in:
Bibliographic Details
Main Authors: Petit, Benoît Eric, Jobelius, Hannah, Bianchino, Gabriella Ines, Guérin, Mélina, Borel, Franck, Chaignon, Philippe, Seemann, Myriam
Format: Article
Language:English
Published: Académie des sciences 2023-12-01
Series:Comptes Rendus. Chimie
Subjects:
Online Access:https://comptes-rendus.academie-sciences.fr/chimie/articles/10.5802/crchim.254/
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1825206124640468992
author Petit, Benoît Eric
Jobelius, Hannah
Bianchino, Gabriella Ines
Guérin, Mélina
Borel, Franck
Chaignon, Philippe
Seemann, Myriam
author_facet Petit, Benoît Eric
Jobelius, Hannah
Bianchino, Gabriella Ines
Guérin, Mélina
Borel, Franck
Chaignon, Philippe
Seemann, Myriam
author_sort Petit, Benoît Eric
collection DOAJ
description Our previous research revealed that (E)-4-amino-3-methylbut-2-en-1-yl diphosphate (AMBPP) is one of the best inhibitors of IspH, a [4Fe–4S]-dependent enzyme involved in the methylerythritol phosphate pathway that is a valuable target for the discovery of new antibacterial and antiparasitic drugs as it is absent in humans. AMBPP has substantial limitations for drug development due to its poor metabolic stability. Here, we investigate the replacement of the diphosphate moiety of AMBPP by more stable mimics: sulfonate, phosphonate or phosphinophosphonate. After synthesis of the derivatives, enzymatic assays demonstrated that none of these AMBPP analogs is an efficient IspH inhibitor.
format Article
id doaj-art-f299621987714a9bbf078465c61d6423
institution Kabale University
issn 1878-1543
language English
publishDate 2023-12-01
publisher Académie des sciences
record_format Article
series Comptes Rendus. Chimie
spelling doaj-art-f299621987714a9bbf078465c61d64232025-02-07T13:38:54ZengAcadémie des sciencesComptes Rendus. Chimie1878-15432023-12-0126S3799210.5802/crchim.25410.5802/crchim.254Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzymePetit, Benoît Eric0Jobelius, Hannah1https://orcid.org/0000-0003-0715-8751Bianchino, Gabriella Ines2https://orcid.org/0000-0002-6553-6063Guérin, Mélina3https://orcid.org/0009-0006-5986-5828Borel, Franck4https://orcid.org/0000-0002-8905-5336Chaignon, Philippe5https://orcid.org/0009-0002-1970-5716Seemann, Myriam6https://orcid.org/0000-0002-2615-1574Equipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceEquipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceEquipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceEquipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceUniv. Grenoble Alpes, CEA, CNRS, IBS, F-38000 Grenoble, FranceEquipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceEquipe Chimie Biologique et Applications Thérapeutiques, Institut de Chimie de Strasbourg, UMR 7177, Université de Strasbourg/CNRS, 4, rue Blaise Pascal, 67070 Strasbourg, FranceOur previous research revealed that (E)-4-amino-3-methylbut-2-en-1-yl diphosphate (AMBPP) is one of the best inhibitors of IspH, a [4Fe–4S]-dependent enzyme involved in the methylerythritol phosphate pathway that is a valuable target for the discovery of new antibacterial and antiparasitic drugs as it is absent in humans. AMBPP has substantial limitations for drug development due to its poor metabolic stability. Here, we investigate the replacement of the diphosphate moiety of AMBPP by more stable mimics: sulfonate, phosphonate or phosphinophosphonate. After synthesis of the derivatives, enzymatic assays demonstrated that none of these AMBPP analogs is an efficient IspH inhibitor.https://comptes-rendus.academie-sciences.fr/chimie/articles/10.5802/crchim.254/MEP pathwayIspHLytBIron–sulfur clustersInhibitor(<i>E</i>)-4-amino-3-methylbut-2-en-1-yl diphosphateAnti-infectives
spellingShingle Petit, Benoît Eric
Jobelius, Hannah
Bianchino, Gabriella Ines
Guérin, Mélina
Borel, Franck
Chaignon, Philippe
Seemann, Myriam
Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
Comptes Rendus. Chimie
MEP pathway
IspH
LytB
Iron–sulfur clusters
Inhibitor
(<i>E</i>)-4-amino-3-methylbut-2-en-1-yl diphosphate
Anti-infectives
title Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
title_full Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
title_fullStr Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
title_full_unstemmed Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
title_short Synthesis and kinetic evaluation of analogs of (E)-4-amino-3-methylbut-2-en-1-yl diphosphate, a potent inhibitor of the IspH metalloenzyme
title_sort synthesis and kinetic evaluation of analogs of e 4 amino 3 methylbut 2 en 1 yl diphosphate a potent inhibitor of the isph metalloenzyme
topic MEP pathway
IspH
LytB
Iron–sulfur clusters
Inhibitor
(<i>E</i>)-4-amino-3-methylbut-2-en-1-yl diphosphate
Anti-infectives
url https://comptes-rendus.academie-sciences.fr/chimie/articles/10.5802/crchim.254/
work_keys_str_mv AT petitbenoiteric synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT jobeliushannah synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT bianchinogabriellaines synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT guerinmelina synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT borelfranck synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT chaignonphilippe synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme
AT seemannmyriam synthesisandkineticevaluationofanalogsofe4amino3methylbut2en1yldiphosphateapotentinhibitoroftheisphmetalloenzyme