The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye

The DNA within the Human Genome involves loci with high polymorphism such as short tandem repeats (STR). The STR polymorphism analysis is extensively used for numerous purposes such as identification studies in forensic sciences, paternity tests, genome mapping, and population studies. In this study...

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Main Authors: Aziz Aksoy, Mehmet Tokdemi̇r, Vahit Konar
Format: Article
Language:English
Published: Society of Turaz Bilim 2024-04-01
Series:Medicine Science
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Online Access:https://www.medicinescience.org/?mno=214563
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author Aziz Aksoy
Mehmet Tokdemi̇r
Vahit Konar
author_facet Aziz Aksoy
Mehmet Tokdemi̇r
Vahit Konar
author_sort Aziz Aksoy
collection DOAJ
description The DNA within the Human Genome involves loci with high polymorphism such as short tandem repeats (STR). The STR polymorphism analysis is extensively used for numerous purposes such as identification studies in forensic sciences, paternity tests, genome mapping, and population studies. In this study, blood and swab samples were obtained from 200 unrelated healthy individuals living in Elazig province. DNA was amplified via the AmpFlSTR Identifiler PCR Amplification Kit (Applied Biosystems, USA) to analyze the 15 STR loci. Using the ABI PRISM310 Genetic Analyzer capillary electrophoresis, the samples were analyzed and the allelic ladder was used to compare and identify the alleles of the samples, the distribution of the allele frequencies and peak values were examined. For statistical analysis Arlequin v.3.11 and PowerStats v.1.2 were used to assess the data. To determine if the allele frequencies were compatible with the Hardy-Weinberg (HW) equilibrium, the Markov chain and the Fisher's exact test p-value (p [Med-Science 2024; 13(4.000): 763-8]
format Article
id doaj-art-f348b7995ac749759cc6471aa026883c
institution Kabale University
issn 2147-0634
language English
publishDate 2024-04-01
publisher Society of Turaz Bilim
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series Medicine Science
spelling doaj-art-f348b7995ac749759cc6471aa026883c2025-02-07T08:49:23ZengSociety of Turaz BilimMedicine Science2147-06342024-04-01134763810.5455/medscience.2024.08.092214563The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, TurkiyeAziz Aksoy0Mehmet Tokdemi̇r1Vahit Konar2Malatya Turgut Ozal University, Faculty of Engineering and Natural Sciences, Department of Bioengineering, Malatya Izmir Katip Celebi University, Department of Forensic Medicine, İzmir, Turkey Amasya University Science and Literature Faculty, Department of Biology, Amasya, TurkeyThe DNA within the Human Genome involves loci with high polymorphism such as short tandem repeats (STR). The STR polymorphism analysis is extensively used for numerous purposes such as identification studies in forensic sciences, paternity tests, genome mapping, and population studies. In this study, blood and swab samples were obtained from 200 unrelated healthy individuals living in Elazig province. DNA was amplified via the AmpFlSTR Identifiler PCR Amplification Kit (Applied Biosystems, USA) to analyze the 15 STR loci. Using the ABI PRISM310 Genetic Analyzer capillary electrophoresis, the samples were analyzed and the allelic ladder was used to compare and identify the alleles of the samples, the distribution of the allele frequencies and peak values were examined. For statistical analysis Arlequin v.3.11 and PowerStats v.1.2 were used to assess the data. To determine if the allele frequencies were compatible with the Hardy-Weinberg (HW) equilibrium, the Markov chain and the Fisher's exact test p-value (p [Med-Science 2024; 13(4.000): 763-8]https://www.medicinescience.org/?mno=214563short tandem repeatampflstrpolymorphismgenetic analyzerhuman identification
spellingShingle Aziz Aksoy
Mehmet Tokdemi̇r
Vahit Konar
The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
Medicine Science
short tandem repeat
ampflstr
polymorphism
genetic analyzer
human identification
title The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
title_full The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
title_fullStr The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
title_full_unstemmed The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
title_short The distribution of allele frequencies of the 15 Short Tandem Repeats loci in Elazığ population, Turkiye
title_sort distribution of allele frequencies of the 15 short tandem repeats loci in elazig population turkiye
topic short tandem repeat
ampflstr
polymorphism
genetic analyzer
human identification
url https://www.medicinescience.org/?mno=214563
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